Fungal Culture, Candidozyma auris (Candida auris) for Whole Genome Sequencing and Antifungal Susceptibility Testing

Data Value
Method Isolation of C. auris specimen from pure isolate for whole genome sequencing (WGS) and antifungal susceptibility (AFST)
CPT Code n/a
Preferred Specimen Isolated C. auris colony subbed on to a Sabouraud Dextrose Slant
Specimen Container Sabouraud Dextrose Slant with a parafilmed lid. Slant placed in a sealed biohazardous transport bag with an absorbent pad. Then packaged into a 95k Pa Specimen Transport Bag.
Specimen Identification Label tube with patient’s first and last name, DOB, collection site, and date/time of collection.
Special Instructions
  • Indicate site of collection or source on requisition.
  • Include the date the sample was collected, date of onset of illness, a brief clinical description or the provisional diagnosis as well as any other pertinent clinical information on the requisition.
Shipping Requirements Store and transport refrigerated at 2-8° C within 3 days.
Sample Rejection Criteria
  • • Sent on an agar plate of any kind 
    • Not leaking or mispackaged
    • Mixed isolate 
    • Specimen quantity not sufficient (QNS) 
    • Specimen not refrigerated 
    • Mislabeled/Unlabeled specimen
Turn-around-time 1-3 weeks