Whole genome sequencing (WGS): Enteric pathogens, surveillance

NSPHL Service Request Form

Data Value
Method Whole genome sequencing (WGS) of enteric pathogens via massively parallel sequencing.
CPT Code N/A
Preferred Specimen Referred isolate
Specimen Container Agar Slant
Specimen Identification Label specimen with patient's first and last name, DOB and date/time of collection.
Shipping Requirements Referred isolates on agar slants may be shipped at room temperature. Refer to normal shipping procedures for all other samples
Sample Rejection Criteria
  • Improper specimen transport
  • Mislabeled specimen
  • Unlabeled specimen
  • Mis-identification of organism
Turn-around-time 1-2 weeks (M-F)